2nqa
From PDBWiki
Catalytic Domain of Human Calpain 8
| Authors | Davis, T.L. Paramanathan, R. Butler-Cole, C. Finerty Jr., P.J. Weigelt, J. Sundstrom, M. Arrowsmith, C.H. Edwards, A.M. Bochkarev, A. Dhe-Paganon, S. |
| Citation | Structure of Human Calpain 8 |
| Release date | 2006-11-21 |
| Exp. Method | X-RAY DIFFRACTION |
| Resolution | 2.2 Å |
| Classification | HYDROLASE/HYDROLASE INHIBITOR |
Sequence
Chain A (326 residues): BlastGSNALKYLGQDFKTLRQQCLDSGVLFKDPEFPAXPSALGYKDLGPGSPQTQGIIWKRPTELXPSPQFIVGGATRTDIXQG GLGDCWLLAAIASLTLNEELLYRVVPRDQDFQENYAGIFHFQFWQYGEWVEVVIDDRLPTKNGQLLFLHSEQGNEFWSAL LEKAYAKLNGXYEALAGGSTVEGFEDFTGGISEFYDLKKPPANLYQIIRKALXAGSLLGCSIDVYSAAEAEAITSQKLVK SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLSDFVRQFSRLEI CNLSPDChain B (326 residues): Blast
GSNALKYLGQDFKTLRQQCLDSGVLFKDPEFPAXPSALGYKDLGPGSPQTQGIIWKRPTELXPSPQFIVGGATRTDIXQG GLGDCWLLAAIASLTLNEELLYRVVPRDQDFQENYAGIFHFQFWQYGEWVEVVIDDRLPTKNGQLLFLHSEQGNEFWSAL LEKAYAKLNGXYEALAGGSTVEGFEDFTGGISEFYDLKKPPANLYQIIRKALXAGSLLGCSIDVYSAAEAEAITSQKLVK SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLSDFVRQFSRLEI CNLSPDChain D (3 residues): Blast
LLRChain E (3 residues): Blast
LLR
User comments
Splice variants
This is one of the few examples where structures for different transcripts of the same protein are available:
| ensembl transcript id | uniprot id | pdb code |
|---|---|---|
| ENST00000366869 | CAN2_HUMAN | 1kfu |
| ENST00000366869 | CAN2_HUMAN | 1kfx |
| ENST00000295006 | CAN2_HUMAN | 2nqa |
See also [1]
Links
Search for 2nqa in:
| Databases | Visualization tools | Analysis tools | Quarternary structure |
|---|---|---|---|

