2nqa

From PDBWiki

Jump to: navigation, search
2nqa

Catalytic Domain of Human Calpain 8

Authors Davis, T.L. Paramanathan, R. Butler-Cole, C. Finerty Jr., P.J. Weigelt, J. Sundstrom, M. Arrowsmith, C.H. Edwards, A.M. Bochkarev, A. Dhe-Paganon, S.
Citation Structure of Human Calpain 8
Release date 2006-11-21
Exp. Method X-RAY DIFFRACTION
Resolution 2.2 Å
Classification HYDROLASE/HYDROLASE INHIBITOR

Sequence

Chain A (326 residues): Blast
GSNALKYLGQDFKTLRQQCLDSGVLFKDPEFPAXPSALGYKDLGPGSPQTQGIIWKRPTELXPSPQFIVGGATRTDIXQG
GLGDCWLLAAIASLTLNEELLYRVVPRDQDFQENYAGIFHFQFWQYGEWVEVVIDDRLPTKNGQLLFLHSEQGNEFWSAL
LEKAYAKLNGXYEALAGGSTVEGFEDFTGGISEFYDLKKPPANLYQIIRKALXAGSLLGCSIDVYSAAEAEAITSQKLVK
SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLSDFVRQFSRLEI
CNLSPD
Chain B (326 residues): Blast
GSNALKYLGQDFKTLRQQCLDSGVLFKDPEFPAXPSALGYKDLGPGSPQTQGIIWKRPTELXPSPQFIVGGATRTDIXQG
GLGDCWLLAAIASLTLNEELLYRVVPRDQDFQENYAGIFHFQFWQYGEWVEVVIDDRLPTKNGQLLFLHSEQGNEFWSAL
LEKAYAKLNGXYEALAGGSTVEGFEDFTGGISEFYDLKKPPANLYQIIRKALXAGSLLGCSIDVYSAAEAEAITSQKLVK
SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLSDFVRQFSRLEI
CNLSPD
Chain D (3 residues): Blast
LLR
Chain E (3 residues): Blast
LLR


User comments

Splice variants

This is one of the few examples where structures for different transcripts of the same protein are available:

ensembl transcript id uniprot id pdb code
ENST00000366869 CAN2_HUMAN 1kfu
ENST00000366869 CAN2_HUMAN 1kfx
ENST00000295006 CAN2_HUMAN 2nqa

See also [1]




Links

 Search for 2nqa in:

Databases Visualization tools Analysis tools Quarternary structure
Personal tools