2oqj
From PDBWiki
Crystal structure analysis of Fab 2G12 in complex with peptide 2G12.1
| Authors | Menendez, A. Calarese, D.A. Stanfield, R.L. Chow, K.C. Scanlan, C.N. Kunert, R. Katinger, H. Burton, D.R. Wilson, I.A. Scott, J.K. |
| Citation | A peptide inhibitor of HIV-1 neutralizing antibody 2G12 is not a structural mimic of the natural carbohydrate epitope on gp120. PubMed |
| Release date | 2008-01-15 |
| Exp. Method | X-RAY DIFFRACTION |
| Resolution | 2.8 Å |
| Classification | Immune system |
Sequence
Chain(s) A D G J (211 residues): BlastVVMTQSPSTLSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSRFSGSGSGTEFTLTISGLQFD DFATYHCQHYAGYSATFGQGTRVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGChain(s) B E H K (224 residues): Blast
EVQLVESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVY LQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKChain(s) C F I L (21 residues): Blast
ACPPSHVLDMRSGTCLAAEGK
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