2oqj

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2oqj

Crystal structure analysis of Fab 2G12 in complex with peptide 2G12.1

Authors Menendez, A. Calarese, D.A. Stanfield, R.L. Chow, K.C. Scanlan, C.N. Kunert, R. Katinger, H. Burton, D.R. Wilson, I.A. Scott, J.K.
Citation A peptide inhibitor of HIV-1 neutralizing antibody 2G12 is not a structural mimic of the natural carbohydrate epitope on gp120. PubMed
Release date 2008-01-15
Exp. Method X-RAY DIFFRACTION
Resolution 2.8 Å
Classification Immune system

Sequence

Chain(s) A D G J (211 residues): Blast
VVMTQSPSTLSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSRFSGSGSGTEFTLTISGLQFD
DFATYHCQHYAGYSATFGQGTRVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE
SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
Chain(s) B E H K (224 residues): Blast
EVQLVESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVY
LQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV
TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
Chain(s) C F I L (21 residues): Blast
ACPPSHVLDMRSGTCLAAEGK


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